SNP Detail For rs7481311
1.Mapping Information
Human SNP ID rs7481311
Human chromosome chr11
Human SNP position 27561582
Pig chromosome chr2
Pig SNP position 35373849
2.Annotation Information
PubMed ID19079260
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19079260
StudyGenome-wide association yields new sequence variants at seven loci that associate with measures of obesity.
Disease/TraitWeight
Initial sample72,598 European ancestry individuals, 1,160 African American individuals
Replication sampleUp to 11,036 European ancestry individuals, 32,615 individuals
Region11p14.1
Chromosome idchr11
Chromosome position27561582
Reported geneBDNF
Mapped geneBDNF-AS
Upstream gene id
Downstream gene id
SNP gene ids497258
Upstream gene distance
Downstream gene distance
SNP risk allelers7481311-T
SNPsrs7481311
Merged0
SNP id current7481311
Contextintron_variant
Intergenic0
Allele frequency0.24
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta3.5
%95 Ci[2.03-4.97] percentage SD increase
PlatformIllumina [305846]
CNVN
Mapped traitbody weight
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004338
Study accessionGCST000299
PubMed ID19079260
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19079260
StudyGenome-wide association yields new sequence variants at seven loci that associate with measures of obesity.
Disease/TraitBody mass index
Initial sample72,598 European ancestry individuals, 1,160 African American individuals
Replication sampleUp to 11,036 European ancestry individuals, 32,615 individuals
Region11p14.1
Chromosome idchr11
Chromosome position27561582
Reported geneBDNF
Mapped geneBDNF-AS
Upstream gene id
Downstream gene id
SNP gene ids497258
Upstream gene distance
Downstream gene distance
SNP risk allelers7481311-T
SNPsrs7481311
Merged0
SNP id current7481311
Contextintron_variant
Intergenic0
Allele frequency0.24
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta3.15
%95 Ci[1.78-4.52] % SD increase
PlatformIllumina [305846]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST000296