Human SNP ID | rs7481311 |
---|---|
Human chromosome | chr11 |
Human SNP position | 27561582 |
Pig chromosome | chr2 |
Pig SNP position | 35373849 |
PubMed ID | 19079260 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19079260 |
Study | Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity. |
Disease/Trait | Weight |
Initial sample | 72,598 European ancestry individuals, 1,160 African American individuals |
Replication sample | Up to 11,036 European ancestry individuals, 32,615 individuals |
Region | 11p14.1 |
Chromosome id | chr11 |
Chromosome position | 27561582 |
Reported gene | BDNF |
Mapped gene | BDNF-AS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 497258 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7481311-T |
SNPs | rs7481311 |
Merged | 0 |
SNP id current | 7481311 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.24 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 3.5 |
%95 Ci | [2.03-4.97] percentage SD increase |
Platform | Illumina [305846] |
CNV | N |
Mapped trait | body weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004338 |
Study accession | GCST000299 |
PubMed ID | 19079260 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19079260 |
Study | Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity. |
Disease/Trait | Body mass index |
Initial sample | 72,598 European ancestry individuals, 1,160 African American individuals |
Replication sample | Up to 11,036 European ancestry individuals, 32,615 individuals |
Region | 11p14.1 |
Chromosome id | chr11 |
Chromosome position | 27561582 |
Reported gene | BDNF |
Mapped gene | BDNF-AS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 497258 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7481311-T |
SNPs | rs7481311 |
Merged | 0 |
SNP id current | 7481311 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.24 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 3.15 |
%95 Ci | [1.78-4.52] % SD increase |
Platform | Illumina [305846] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST000296 |