Human SNP ID | rs745580 |
---|---|
Human chromosome | chr7 |
Human SNP position | 25968432 |
Pig chromosome | chr18 |
Pig SNP position | 51195902 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 7p15.2 |
Chromosome id | chr7 |
Chromosome position | 25968432 |
Reported gene | NFE2L3 |
Mapped gene | LOC105375199 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105375199 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs745580-A |
SNPs | rs745580 |
Merged | 0 |
SNP id current | 745580 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | 0.438 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (Dinner intake, adj EER ) |
Or beta | 0.04 |
%95 Ci | [NR] kcal increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | energy intake |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003939 |
Study accession | GCST001762 |