SNP Detail For rs745580
1.Mapping Information
Human SNP ID rs745580
Human chromosome chr7
Human SNP position 25968432
Pig chromosome chr18
Pig SNP position 51195902
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region7p15.2
Chromosome idchr7
Chromosome position25968432
Reported geneNFE2L3
Mapped geneLOC105375199
Upstream gene id
Downstream gene id
SNP gene ids105375199
Upstream gene distance
Downstream gene distance
SNP risk allelers745580-A
SNPsrs745580
Merged0
SNP id current745580
Contextregulatory_region_variant
Intergenic0
Allele frequency0.438
P value0.0000003
Pvalue mlog6.52287874528033
P value text(Dinner intake, adj EER )
Or beta0.04
%95 Ci[NR] kcal increase
PlatformIllumina [899892]
CNVN
Mapped traitenergy intake
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003939
Study accessionGCST001762