SNP Detail For rs7431992
1.Mapping Information
Human SNP ID rs7431992
Human chromosome chr3
Human SNP position 54319213
Pig chromosome chr13
Pig SNP position 39554545
2.Annotation Information
PubMed ID26339675
JournalAnn Clin Transl Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/26339675
StudyF-box/LRR-repeat protein 7 is genetically associated with Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (late onset)
Initial sample2,451 Caribbean Hispanic cases, 2,063 Caribbean Hispanic controls
Replication sample550 Caribbean Hispanic cases, 236 Caribbean Hispanic controls
Region3p21.1
Chromosome idchr3
Chromosome position54319213
Reported geneCACNA2D3
Mapped geneCACNA2D3
Upstream gene id
Downstream gene id
SNP gene ids55799
Upstream gene distance
Downstream gene distance
SNP risk allelers7431992-A
SNPsrs7431992
Merged
SNP id current7431992
Contextintron_variant
Intergenic0
Allele frequency0.1
P value0.000002
Pvalue mlog5.69897000433601
P value text(adjusted for APOE)
Or beta1.46
%95 Ci[1.25-1.71]
PlatformAffymetrix, Illumina [8837542] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST002983