Human SNP ID | rs74157220 |
---|---|
Human chromosome | chr10 |
Human SNP position | 113118108 |
Pig chromosome | chr14 |
Pig SNP position | 134741996 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Serum dimethylarginine levels (asymmetric/symetric ratio) |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 10q25.3 |
Chromosome id | chr10 |
Chromosome position | 113118108 |
Reported gene | NR |
Mapped gene | TCF7L2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6934 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs74157220-T |
SNPs | rs74157220 |
Merged | 0 |
SNP id current | 74157220 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.031 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.267 |
%95 Ci | [0.15-0.38] unit decrease |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002242 |