SNP Detail For rs741013
1.Mapping Information
Human SNP ID rs741013
Human chromosome chr3
Human SNP position 64306961
Pig chromosome chr13
Pig SNP position 50305302
2.Annotation Information
PubMed ID23870195
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23870195
StudyGenetics of coronary artery calcification among African Americans, a meta-analysis.
Disease/TraitCoronary artery calcification
Initial sample5,823 African American individuals
Replication sample9,992 European ancestry individuals
Region3p14.1
Chromosome idchr3
Chromosome position64306961
Reported genePRICKLE2
Mapped genePRICKLE2
Upstream gene id
Downstream gene id
SNP gene ids166336
Upstream gene distance
Downstream gene distance
SNP risk allelers741013-A
SNPsrs741013
Merged0
SNP id current741013
Contextintron_variant
Intergenic0
Allele frequency0.98
P value0.0000005
Pvalue mlog6.30102999566398
P value text(AA)
Or beta0.97
%95 Ci[0.6-1.34] unit decrease
PlatformAffymetrix, Illumina [up to 2727966] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST002097