SNP Detail For rs740145
1.Mapping Information
Human SNP ID rs740145
Human chromosome chr7
Human SNP position 29881908
Pig chromosome chr18
Pig SNP position 47405364
2.Annotation Information
PubMed ID22969067
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/22969067
StudyGenetic variants near PDGFRA are associated with corneal curvature in Australians.
Disease/TraitCorneal curvature
Initial sample1,788 European ancestry twins and family members, 1,013 European ancestry unrelated individuals
Replication sampleNA
Region7p14.3
Chromosome idchr7
Chromosome position29881908
Reported geneWIPF3
Mapped geneWIPF3
Upstream gene id
Downstream gene id
SNP gene ids644150
Upstream gene distance
Downstream gene distance
SNP risk allelers740145-C
SNPsrs740145
Merged0
SNP id current740145
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.1732
%95 Ci[0.10-0.25] mm decrease
PlatformIllumina [1704858] (imputed)
CNVN
Mapped traitcorneal topography
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004345
Study accessionGCST001680