Human SNP ID | rs740083 |
---|---|
Human chromosome | chr7 |
Human SNP position | 49429407 |
Pig chromosome | chr9 |
Pig SNP position | 149281339 |
PubMed ID | 25436638 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25436638 |
Study | Genetic Variants Associated with Serum Thyroid Stimulating Hormone (TSH) Levels in European Americans and African Americans from the eMERGE Network. |
Disease/Trait | Serum thyroid-stimulating hormone levels |
Initial sample | 4,501 European ancestry individuals, 351 African American individuals |
Replication sample | NA |
Region | 7p12.2 |
Chromosome id | chr7 |
Chromosome position | 49429407 |
Reported gene | VWC2 |
Mapped gene | CDC14C - VWC2 |
Upstream gene id | 168448 |
Downstream gene id | 375567 |
SNP gene ids | |
Upstream gene distance | 501954 |
Downstream gene distance | 344254 |
SNP risk allele | rs740083-A |
SNPs | rs740083 |
Merged | 0 |
SNP id current | 740083 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.24 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (EA) |
Or beta | 0.05 |
%95 Ci | [0.03-0.07] unit decrease |
Platform | Illumina [up to 905285] |
CNV | N |
Mapped trait | thyroid stimulating hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004748 |
Study accession | GCST002707 |