Human SNP ID | rs7395555 |
---|---|
Human chromosome | chr11 |
Human SNP position | 80347435 |
Pig chromosome | chr9 |
Pig SNP position | 16285622 |
PubMed ID | 23241943 |
---|---|
Journal | Pharmacogenet Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/23241943 |
Study | Genome-wide association study of patient-rated and clinician-rated global impression of severity during antipsychotic treatment. |
Disease/Trait | Response to antipsychotic treatment |
Initial sample | Up to 421 European ancestry Schizophrenia cases, up to 214 African American individuals, up to 103 individuals |
Replication sample | NA |
Region | 11q14.1 |
Chromosome id | chr11 |
Chromosome position | 80347435 |
Reported gene | intergenic |
Mapped gene | LOC105369408 - LOC101928964 |
Upstream gene id | 105369408 |
Downstream gene id | 101928964 |
SNP gene ids | |
Upstream gene distance | 121482 |
Downstream gene distance | 111540 |
SNP risk allele | rs7395555-C |
SNPs | rs7395555 |
Merged | 0 |
SNP id current | 7395555 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.145 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (Effect of Ziprasidone on CGI-S) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [492900] |
CNV | N |
Mapped trait | response to ziprasidone |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097337 |
Study accession | GCST001773 |