SNP Detail For rs73838651
1.Mapping Information
Human SNP ID rs73838651
Human chromosome chr4
Human SNP position 104946758
Pig chromosome chr8
Pig SNP position 125281459
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region4q24
Chromosome idchr4
Chromosome position104946758
Reported geneIntergenic
Mapped geneLOC643675
Upstream gene id
Downstream gene id
SNP gene ids643675
Upstream gene distance
Downstream gene distance
SNP risk allelers73838651-C
SNPsrs73838651
Merged0
SNP id current73838651
Contextintron_variant
Intergenic0
Allele frequency0.989
P value0.0000004
Pvalue mlog6.39794000867203
P value text(AA)
Or beta0.087
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264