Human SNP ID | rs7379133 |
---|---|
Human chromosome | chr5 |
Human SNP position | 2149096 |
Pig chromosome | chr16 |
Pig SNP position | 85327041 |
PubMed ID | 25644384 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25644384 |
Study | Genetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53鈥?49). |
Disease/Trait | Cognitive function |
Initial sample | 51,719 European ancestry individuals 1,473 Erasmus Rupchen Family individuals, 327 Korculan individuals, 430 Orcadian individuals |
Replication sample | NA |
Region | 5p15.33 |
Chromosome id | chr5 |
Chromosome position | 2149096 |
Reported gene | intergenic |
Mapped gene | LOC105374618 - LOC100506858 |
Upstream gene id | 105374618 |
Downstream gene id | 100506858 |
SNP gene ids | |
Upstream gene distance | 29710 |
Downstream gene distance | 154624 |
SNP risk allele | rs7379133-? |
SNPs | rs7379133 |
Merged | 0 |
SNP id current | 7379133 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.1113 |
%95 Ci | [0.062-0.160] unit increase |
Platform | Affymetrix, Illumina [2478500] (imputed) |
CNV | N |
Mapped trait | cognition |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003925 |
Study accession | GCST002774 |