SNP Detail For rs73777486
1.Mapping Information
Human SNP ID rs73777486
Human chromosome chr5
Human SNP position 101065730
Pig chromosome chr2
Pig SNP position 110906020
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5q21.1
Chromosome idchr5
Chromosome position101065730
Reported geneIntergenic
Mapped geneLOC107986437 - LOC107986438
Upstream gene id107986437
Downstream gene id107986438
SNP gene ids
Upstream gene distance121181
Downstream gene distance179869
SNP risk allelers73777486-G
SNPsrs73777486
Merged0
SNP id current73777486
Contextintergenic_variant
Intergenic1
Allele frequency0.976
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.052
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264