SNP Detail For rs73712171
1.Mapping Information
Human SNP ID rs73712171
Human chromosome chr7
Human SNP position 101486484
Pig chromosome chr3
Pig SNP position 8638606
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitPR interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region7q22.1
Chromosome idchr7
Chromosome position101486484
Reported geneNR
Mapped geneCOL26A1
Upstream gene id
Downstream gene id
SNP gene ids136227
Upstream gene distance
Downstream gene distance
SNP risk allelers73712171-?
SNPsrs73712171
Merged0
SNP id current73712171
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitPR interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002279