Human SNP ID | rs737008 |
---|---|
Human chromosome | chr16 |
Human SNP position | 11281009 |
Pig chromosome | chr3 |
Pig SNP position | 32650858 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 16p13.13 |
Chromosome id | chr16 |
Chromosome position | 11281009 |
Reported gene | PRM1 |
Mapped gene | PRM1, LOC105371082 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5619, 105371082 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs737008-A |
SNPs | rs737008 |
Merged | 0 |
SNP id current | 737008 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.352 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (Protein ) |
Or beta | 0.04 |
%95 Ci | [NR] kg/y increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | body composition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005106 |
Study accession | GCST001762 |
PubMed ID | 23251661 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 16p13.13 |
Chromosome id | chr16 |
Chromosome position | 11281009 |
Reported gene | PRM1 |
Mapped gene | PRM1, LOC105371082 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5619, 105371082 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs737008-A |
SNPs | rs737008 |
Merged | 0 |
SNP id current | 737008 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.352 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (Protein deposition ) |
Or beta | 0.04 |
%95 Ci | [NR] kcal/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | body composition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005106 |
Study accession | GCST001762 |
PubMed ID | 23251661 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 16p13.13 |
Chromosome id | chr16 |
Chromosome position | 11281009 |
Reported gene | PRM1 |
Mapped gene | PRM1, LOC105371082 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5619, 105371082 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs737008-A |
SNPs | rs737008 |
Merged | 0 |
SNP id current | 737008 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.352 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Fat free mass change ) |
Or beta | 0.04 |
%95 Ci | [NR] kg/y increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | body composition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005106 |
Study accession | GCST001762 |