Human SNP ID | rs736408 |
---|---|
Human chromosome | chr3 |
Human SNP position | 52801338 |
Pig chromosome | chr13 |
Pig SNP position | 38113001 |
PubMed ID | 21926972 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21926972 |
Study | Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. |
Disease/Trait | Bipolar disorder |
Initial sample | 7,481 European ancestry cases, 9,250 European ancestry controls |
Replication sample | 4,496 European ancestry cases, 42,422 European ancestry controls |
Region | 3p21.1 |
Chromosome id | chr3 |
Chromosome position | 52801338 |
Reported gene | PHF7, NT5DC2, MUSTN1, LOC440957, GNL3, GLYCTK, GLT8D1, DNAH1, BAP1, ALAS1, ITIH3, ITIH4, PRKCD, ITIH1, NEK4, PBRM1, WDR82, TWF2, TNNC1, TMEM110, TLR9, SPCS1, SNORD69, NISCH, STAB1, SNORD19, SNORD19B, SFMBT1, SEMA3G, RFT1, PPM1M |
Mapped gene | ITIH3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3699 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs736408-C |
SNPs | rs736408 |
Merged | 0 |
SNP id current | 736408 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.1 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [2415422] (imputed) |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST001241 |