SNP Detail For rs735951
1.Mapping Information
Human SNP ID rs735951
Human chromosome chr16
Human SNP position 11599680
Pig chromosome chr3
Pig SNP position 32366588
2.Annotation Information
PubMed ID24952745
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24952745
StudyGenetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.
Disease/TraitQT interval
Initial sampleUp to 70,389 European ancestry individuals, up to 672 Orcadian individuals
Replication sampleUp to 33,316 European ancestry individuals
Region16p13.13
Chromosome idchr16
Chromosome position11599680
Reported geneLITAF
Mapped geneLITAF
Upstream gene id
Downstream gene id
SNP gene ids9516
Upstream gene distance
Downstream gene distance
SNP risk allelers735951-A
SNPsrs735951
Merged0
SNP id current735951
Contextintron_variant
Intergenic0
Allele frequency0.455
P value2E-28
Pvalue mlog27.698970004336
P value text
Or beta1.15
%95 Ci[0.95-1.35] unit decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST002500