SNP Detail For rs7356941
1.Mapping Information
Human SNP ID rs7356941
Human chromosome chr6
Human SNP position 107473269
Pig chromosome chr1
Pig SNP position 82764344
2.Annotation Information
PubMed ID25514360
JournalAm J Respir Cell Mol Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/25514360
StudyGenome Wide Association Study Identifies Novel Loci Associated with Airway Responsiveness in COPD.
Disease/TraitAirway responsiveness in chronic obstructive pulmonary disease
Initial sampleUp to 4,108 European American cases
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position107473269
Reported geneintergenic
Mapped genePDSS2 - SOBP
Upstream gene id57107
Downstream gene id55084
SNP gene ids
Upstream gene distance13567
Downstream gene distance16829
SNP risk allelers7356941-G
SNPsrs7356941
Merged0
SNP id current7356941
Contextintergenic_variant
Intergenic1
Allele frequency0.088
P value0.000001
Pvalue mlog6
P value text(O鈥機onnor Slope)
Or beta0.057
%95 Ci[NR] unit increase
PlatformIllumina [546355]
CNVN
Mapped traitairway responsiveness measurement, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006897, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST002724
PubMed ID25514360
JournalAm J Respir Cell Mol Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/25514360
StudyGenome Wide Association Study Identifies Novel Loci Associated with Airway Responsiveness in COPD.
Disease/TraitAirway responsiveness in chronic obstructive pulmonary disease
Initial sampleUp to 4,108 European American cases
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position107473269
Reported geneintergenic
Mapped genePDSS2 - SOBP
Upstream gene id57107
Downstream gene id55084
SNP gene ids
Upstream gene distance13567
Downstream gene distance16829
SNP risk allelers7356941-A
SNPsrs7356941
Merged0
SNP id current7356941
Contextintergenic_variant
Intergenic1
Allele frequency0.088
P value0.000002
Pvalue mlog5.69897000433601
P value text(Continous PC20)
Or beta0.063
%95 Ci[NR] unit increase
PlatformIllumina [546355]
CNVN
Mapped traitairway responsiveness measurement, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006897, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST002724