Human SNP ID | rs733331 |
---|---|
Human chromosome | chr2 |
Human SNP position | 172681585 |
Pig chromosome | chr15 |
Pig SNP position | 88035619 |
PubMed ID | 25187374 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25187374 |
Study | Genome-wide association meta-analysis identifies novel variants associated with fasting plasma glucose in East Asians. |
Disease/Trait | Fasting plasma glucose |
Initial sample | 24,740 East Asian ancestry individuals |
Replication sample | 21,345 East Asian ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 172681585 |
Reported gene | PDK1, RAPGEF4 |
Mapped gene | PDK1 - RAPGEF4-AS1 |
Upstream gene id | 5163 |
Downstream gene id | 91149 |
SNP gene ids | |
Upstream gene distance | 10704 |
Downstream gene distance | 41604 |
SNP risk allele | rs733331-? |
SNPs | rs733331 |
Merged | 0 |
SNP id current | 733331 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000000007 |
Pvalue mlog | 10.1549019599857 |
P value text | |
Or beta | 0.036 |
%95 Ci | [0.024-0.048] unit increase |
Platform | Affymetrix, Illumina [up to 2315813] (imputed) |
CNV | N |
Mapped trait | fasting blood glucose measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004465 |
Study accession | GCST002586 |