SNP Detail For rs733331
1.Mapping Information
Human SNP ID rs733331
Human chromosome chr2
Human SNP position 172681585
Pig chromosome chr15
Pig SNP position 88035619
2.Annotation Information
PubMed ID25187374
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25187374
StudyGenome-wide association meta-analysis identifies novel variants associated with fasting plasma glucose in East Asians.
Disease/TraitFasting plasma glucose
Initial sample24,740 East Asian ancestry individuals
Replication sample21,345 East Asian ancestry individuals
Region2q31.1
Chromosome idchr2
Chromosome position172681585
Reported genePDK1, RAPGEF4
Mapped genePDK1 - RAPGEF4-AS1
Upstream gene id5163
Downstream gene id91149
SNP gene ids
Upstream gene distance10704
Downstream gene distance41604
SNP risk allelers733331-?
SNPsrs733331
Merged0
SNP id current733331
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.00000000007
Pvalue mlog10.1549019599857
P value text
Or beta0.036
%95 Ci[0.024-0.048] unit increase
PlatformAffymetrix, Illumina [up to 2315813] (imputed)
CNVN
Mapped traitfasting blood glucose measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004465
Study accessionGCST002586