SNP Detail For rs7328626
1.Mapping Information
Human SNP ID rs7328626
Human chromosome chr13
Human SNP position 53576772
Pig chromosome chr11
Pig SNP position 27890205
2.Annotation Information
PubMed ID26220383
JournalEpilepsy Res
Linkwww.ncbi.nlm.nih.gov/pubmed/26220383
StudyGWAS identifies two susceptibility loci for lamotrigine-induced skin rash in patients with epilepsy.
Disease/TraitEpilepsy and lamotrigine-induced maculopapular eruptions
Initial sample34 Korean ancestry cases, 1,080 Korean ancestry healthy controls
Replication sampleNA
Region13q14.3
Chromosome idchr13
Chromosome position53576772
Reported geneLINC00558
Mapped geneLOC105370210 - LINC00558
Upstream gene id105370210
Downstream gene id100861552
SNP gene ids
Upstream gene distance12469
Downstream gene distance238647
SNP risk allelers7328626-?
SNPsrs7328626
Merged
SNP id current7328626
Contextintergenic_variant
Intergenic1
Allele frequency0.01
P value0.000000008
Pvalue mlog8.09691001300805
P value text
Or beta9.7
%95 Ci[NR]
PlatformAffymetrix [4893794] (imputed)
CNVN
Mapped traitresponse to lamotrigine, maculopapular eruption, epilepsy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007661, http://www.ebi.ac.uk/efo/EFO_1001253, http://www.ebi.ac.uk/efo/EFO_0000474
Study accessionGCST002949