Human SNP ID | rs732505 |
---|---|
Human chromosome | chr19 |
Human SNP position | 5582524 |
Pig chromosome | chr2 |
Pig SNP position | 74080803 |
PubMed ID | 21810271 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21810271 |
Study | Combined analysis of three genome-wide association studies on vWF and FVIII plasma levels. |
Disease/Trait | vWF and FVIII levels |
Initial sample | 1,624 European ancestry individuals |
Replication sample | NA |
Region | 19p13.3 |
Chromosome id | chr19 |
Chromosome position | 5582524 |
Reported gene | SAFB2 |
Mapped gene | SNRPEP4 - SAFB2 |
Upstream gene id | 100130109 |
Downstream gene id | 9667 |
SNP gene ids | |
Upstream gene distance | 5573 |
Downstream gene distance | 4469 |
SNP risk allele | rs732505-A |
SNPs | rs732505 |
Merged | 0 |
SNP id current | 732505 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.09 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (vWF levels) |
Or beta | 0.25 |
%95 Ci | [0.13-0.37] IU/dL increase |
Platform | Illumina [442728] |
CNV | N |
Mapped trait | von Willebrand factor measurement, coagulation factor measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004629, http://www.ebi.ac.uk/efo/EFO_0004634 |
Study accession | GCST001188 |