SNP Detail For rs7324845
1.Mapping Information
Human SNP ID rs7324845
Human chromosome chr13
Human SNP position 46129007
Pig chromosome chr11
Pig SNP position 21683744
2.Annotation Information
PubMed ID23213074
JournalHepatology
Linkwww.ncbi.nlm.nih.gov/pubmed/23213074
StudyAssociation between liver-specific gene polymorphisms and their expression levels with nonalcoholic fatty liver disease.
Disease/TraitNon-alcoholic fatty liver disease histology (other)
Initial sample126 European ancestry adolescent cases, 802 European ancestry adolescent controls
Replication sampleNA
Region13q14.13
Chromosome idchr13
Chromosome position46129007
Reported geneLCP1
Mapped geneLCP1
Upstream gene id
Downstream gene id
SNP gene ids3936
Upstream gene distance
Downstream gene distance
SNP risk allelers7324845-A
SNPsrs7324845
Merged0
SNP id current7324845
Contextintron_variant
Intergenic0
Allele frequency0.096
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta3.29
%95 Ci[0.76-5.82]
PlatformIllumina [2078805] (imputed)
CNVN
Mapped traitnon-alcoholic fatty liver disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003095
Study accessionGCST001766