Human SNP ID | rs7324845 |
---|---|
Human chromosome | chr13 |
Human SNP position | 46129007 |
Pig chromosome | chr11 |
Pig SNP position | 21683744 |
PubMed ID | 23213074 |
---|---|
Journal | Hepatology |
Link | www.ncbi.nlm.nih.gov/pubmed/23213074 |
Study | Association between liver-specific gene polymorphisms and their expression levels with nonalcoholic fatty liver disease. |
Disease/Trait | Non-alcoholic fatty liver disease histology (other) |
Initial sample | 126 European ancestry adolescent cases, 802 European ancestry adolescent controls |
Replication sample | NA |
Region | 13q14.13 |
Chromosome id | chr13 |
Chromosome position | 46129007 |
Reported gene | LCP1 |
Mapped gene | LCP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3936 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7324845-A |
SNPs | rs7324845 |
Merged | 0 |
SNP id current | 7324845 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.096 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 3.29 |
%95 Ci | [0.76-5.82] |
Platform | Illumina [2078805] (imputed) |
CNV | N |
Mapped trait | non-alcoholic fatty liver disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003095 |
Study accession | GCST001766 |