SNP Detail For rs731716
1.Mapping Information
Human SNP ID rs731716
Human chromosome chr11
Human SNP position 125389404
Pig chromosome chr9
Pig SNP position 58153335
2.Annotation Information
PubMed ID25469926
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25469926
StudyNovel loci associated with usual sleep duration: the CHARGE Consortium Genome-Wide Association Study.
Disease/TraitSleep duration
Initial sample47,180 European ancestry individuals
Replication sample4,771 African American individuals
Region11q24.2
Chromosome idchr11
Chromosome position125389404
Reported genePKNOX2
Mapped genePKNOX2
Upstream gene id
Downstream gene id
SNP gene ids63876
Upstream gene distance
Downstream gene distance
SNP risk allelers731716-?
SNPsrs731716
Merged0
SNP id current731716
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(EA)
Or beta1.96
%95 Ci[1.12-2.8] unit increase
PlatformAffymetrix, Illumina [2033301]
CNVN
Mapped traitsleep duration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005271
Study accessionGCST002711