Human SNP ID | rs731716 |
---|---|
Human chromosome | chr11 |
Human SNP position | 125389404 |
Pig chromosome | chr9 |
Pig SNP position | 58153335 |
PubMed ID | 25469926 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25469926 |
Study | Novel loci associated with usual sleep duration: the CHARGE Consortium Genome-Wide Association Study. |
Disease/Trait | Sleep duration |
Initial sample | 47,180 European ancestry individuals |
Replication sample | 4,771 African American individuals |
Region | 11q24.2 |
Chromosome id | chr11 |
Chromosome position | 125389404 |
Reported gene | PKNOX2 |
Mapped gene | PKNOX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 63876 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs731716-? |
SNPs | rs731716 |
Merged | 0 |
SNP id current | 731716 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (EA) |
Or beta | 1.96 |
%95 Ci | [1.12-2.8] unit increase |
Platform | Affymetrix, Illumina [2033301] |
CNV | N |
Mapped trait | sleep duration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005271 |
Study accession | GCST002711 |