SNP Detail For rs7314811
1.Mapping Information
Human SNP ID rs7314811
Human chromosome chr12
Human SNP position 11809639
Pig chromosome chr5
Pig SNP position 63244847
2.Annotation Information
PubMed ID23382691
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23382691
StudyLoci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
Disease/TraitIgG glycosylation
Initial sample2,247 European ancestry individuals
Replication sampleNA
Region12p13.2
Chromosome idchr12
Chromosome position11809639
Reported geneNR
Mapped geneETV6
Upstream gene id
Downstream gene id
SNP gene ids2120
Upstream gene distance
Downstream gene distance
SNP risk allelers7314811-C
SNPsrs7314811
Merged0
SNP id current7314811
Contextintron_variant
Intergenic0
Allele frequency0.35010278555506
P value0.000004
Pvalue mlog5.39794000867203
P value text(IGP35)
Or beta0.1452
%95 Ci[0.083-0.207] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitserum IgG glycosylation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005193
Study accessionGCST001848