SNP Detail For rs7314056
1.Mapping Information
Human SNP ID rs7314056
Human chromosome chr12
Human SNP position 121905058
Pig chromosome chr14
Pig SNP position 32610924
2.Annotation Information
PubMed ID24586186
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24586186
StudyGenome-wide association study of metabolic traits reveals novel gene-metabolite-disease links.
Disease/TraitUrinary metabolites (H-NMR features)
Initial sample835 European ancestry individuals
Replication sample601 Brazilian individuals
Region12q24.31
Chromosome idchr12
Chromosome position121905058
Reported genePSMD9
Mapped genePSMD9
Upstream gene id
Downstream gene id
SNP gene ids5715
Upstream gene distance
Downstream gene distance
SNP risk allelers7314056-C
SNPsrs7314056
Merged0
SNP id current7314056
Contextintron_variant
Intergenic0
Allele frequency0.13
P value0.0000000000000004
Pvalue mlog15.397940008672
P value text(1.3625, 2-Hydroxyisobutyrate)
Or beta0.44
%95 Ci[NR] unit decrease
PlatformIllumina [713870] (imputed)
CNVN
Mapped traiturinary metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005116
Study accessionGCST002364