Human SNP ID | rs7314056 |
---|---|
Human chromosome | chr12 |
Human SNP position | 121905058 |
Pig chromosome | chr14 |
Pig SNP position | 32610924 |
PubMed ID | 24586186 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24586186 |
Study | Genome-wide association study of metabolic traits reveals novel gene-metabolite-disease links. |
Disease/Trait | Urinary metabolites (H-NMR features) |
Initial sample | 835 European ancestry individuals |
Replication sample | 601 Brazilian individuals |
Region | 12q24.31 |
Chromosome id | chr12 |
Chromosome position | 121905058 |
Reported gene | PSMD9 |
Mapped gene | PSMD9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5715 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7314056-C |
SNPs | rs7314056 |
Merged | 0 |
SNP id current | 7314056 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.13 |
P value | 0.0000000000000004 |
Pvalue mlog | 15.397940008672 |
P value text | (1.3625, 2-Hydroxyisobutyrate) |
Or beta | 0.44 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [713870] (imputed) |
CNV | N |
Mapped trait | urinary metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005116 |
Study accession | GCST002364 |