SNP Detail For rs7312933
1.Mapping Information
Human SNP ID rs7312933
Human chromosome chr12
Human SNP position 42109665
Pig chromosome chr13
Pig SNP position 59958808
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (linoleic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region12q12
Chromosome idchr12
Chromosome position42109665
Reported geneNR
Mapped geneGXYLT1
Upstream gene id
Downstream gene id
SNP gene ids283464
Upstream gene distance
Downstream gene distance
SNP risk allelers7312933-T
SNPsrs7312933
Merged
SNP id current7312933
Contextsynonymous_variant
Intergenic0
Allele frequency0.5901
P value0.000001
Pvalue mlog6
P value text
Or beta0.0254
%95 Ci[0.015-0.036] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitlinoleic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006807
Study accessionGCST003239