SNP Detail For rs73114594
1.Mapping Information
Human SNP ID rs73114594
Human chromosome chr3
Human SNP position 77603591
Pig chromosome chr13
Pig SNP position 187719977
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (5-HIAA/ MHPG Ratio)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region3p12.3
Chromosome idchr3
Chromosome position77603591
Reported geneROBO2
Mapped geneROBO2
Upstream gene id
Downstream gene id
SNP gene ids6092
Upstream gene distance
Downstream gene distance
SNP risk allelers73114594-A
SNPsrs73114594
Merged0
SNP id current73114594
Contextintron_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.272
%95 Ciunit increase
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitMHPG measurement, 5-HIAA measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005133, http://www.ebi.ac.uk/efo/EFO_0005132
Study accessionGCST001821