Human SNP ID | rs73082373 |
---|---|
Human chromosome | chr7 |
Human SNP position | 22954567 |
Pig chromosome | chr9 |
Pig SNP position | 101220403 |
PubMed ID | 24024966 |
---|---|
Journal | J Clin Periodontol |
Link | www.ncbi.nlm.nih.gov/pubmed/24024966 |
Study | Genome-wide association study of chronic periodontitis in a general German population. |
Disease/Trait | Periodontitis (Mean PAL) |
Initial sample | up to 4,032 European ancestry individuals |
Replication sample | NA |
Region | 7p15.3 |
Chromosome id | chr7 |
Chromosome position | 22954567 |
Reported gene | FAM126A |
Mapped gene | FAM126A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84668 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs73082373-T |
SNPs | rs73082373 |
Merged | 0 |
SNP id current | 73082373 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.95 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Age 20-60 years) |
Or beta | 0.126 |
%95 Ci | [0.071-0.181] unit decrease |
Platform | Affymetrix, Illumina [up to 17585496] (imputed) |
CNV | N |
Mapped trait | periodontitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000649 |
Study accession | GCST002127 |