SNP Detail For rs73082373
1.Mapping Information
Human SNP ID rs73082373
Human chromosome chr7
Human SNP position 22954567
Pig chromosome chr9
Pig SNP position 101220403
2.Annotation Information
PubMed ID24024966
JournalJ Clin Periodontol
Linkwww.ncbi.nlm.nih.gov/pubmed/24024966
StudyGenome-wide association study of chronic periodontitis in a general German population.
Disease/TraitPeriodontitis (Mean PAL)
Initial sampleup to 4,032 European ancestry individuals
Replication sampleNA
Region7p15.3
Chromosome idchr7
Chromosome position22954567
Reported geneFAM126A
Mapped geneFAM126A
Upstream gene id
Downstream gene id
SNP gene ids84668
Upstream gene distance
Downstream gene distance
SNP risk allelers73082373-T
SNPsrs73082373
Merged0
SNP id current73082373
Contextintron_variant
Intergenic0
Allele frequency0.95
P value0.000006
Pvalue mlog5.22184874961635
P value text(Age 20-60 years)
Or beta0.126
%95 Ci[0.071-0.181] unit decrease
PlatformAffymetrix, Illumina [up to 17585496] (imputed)
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002127