SNP Detail For rs7308134
1.Mapping Information
Human SNP ID rs7308134
Human chromosome chr12
Human SNP position 1878079
Pig chromosome chr5
Pig SNP position 71202914
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitQRS duration in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region12p13.33
Chromosome idchr12
Chromosome position1878079
Reported geneNR
Mapped geneCACNA2D4
Upstream gene id
Downstream gene id
SNP gene ids93589
Upstream gene distance
Downstream gene distance
SNP risk allelers7308134-?
SNPsrs7308134
Merged0
SNP id current7308134
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitQRS duration, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005055, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002284