Human SNP ID | rs7308134 |
---|---|
Human chromosome | chr12 |
Human SNP position | 1878079 |
Pig chromosome | chr5 |
Pig SNP position | 71202914 |
PubMed ID | 24324551 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24324551 |
Study | Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. |
Disease/Trait | QRS duration in Tripanosoma cruzi seropositivity |
Initial sample | 580 Brazilian ancestry individuals |
Replication sample | NA |
Region | 12p13.33 |
Chromosome id | chr12 |
Chromosome position | 1878079 |
Reported gene | NR |
Mapped gene | CACNA2D4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 93589 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7308134-? |
SNPs | rs7308134 |
Merged | 0 |
SNP id current | 7308134 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5486770] (imputed) |
CNV | N |
Mapped trait | QRS duration, Trypanosoma cruzi seropositivity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005055, http://www.ebi.ac.uk/efo/EFO_0005530 |
Study accession | GCST002284 |