SNP Detail For rs73004856
1.Mapping Information
Human SNP ID rs73004856
Human chromosome chr1
Human SNP position 152515441
Pig chromosome chr4
Pig SNP position 105858356
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q21.3
Chromosome idchr1
Chromosome position152515441
Reported geneCRCT1
Mapped geneCRCT1
Upstream gene id
Downstream gene id
SNP gene ids54544
Upstream gene distance
Downstream gene distance
SNP risk allelers73004856-A
SNPsrs73004856
Merged0
SNP id current73004856
Contextmissense_variant
Intergenic0
Allele frequency0.024
P value0.000003
Pvalue mlog5.52287874528033
P value text(NEFA )
Or beta0.02
%95 Ci[NR] mmol/L increase
PlatformIllumina [899892]
CNVN
Mapped traitfatty acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005110
Study accessionGCST001762