Human SNP ID | rs7295246 |
---|---|
Human chromosome | chr12 |
Human SNP position | 43573874 |
Pig chromosome | chr5 |
Pig SNP position | 77501811 |
PubMed ID | 24162737 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24162737 |
Study | Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease (late onset) |
Initial sample | 17,008 European ancestry cases, 37,154 European ancestry controls |
Replication sample | 8,572 European ancestry cases, 11,312 European ancestry controls |
Region | 12q12 |
Chromosome id | chr12 |
Chromosome position | 43573874 |
Reported gene | ADAMTS20 |
Mapped gene | LOC400026 - PUS7L |
Upstream gene id | 400026 |
Downstream gene id | 83448 |
SNP gene ids | |
Upstream gene distance | 1703 |
Downstream gene distance | 154151 |
SNP risk allele | rs7295246-G |
SNPs | rs7295246 |
Merged | 0 |
SNP id current | 7295246 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.406 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 1.07 |
%95 Ci | [1.04-1.10] |
Platform | Illumina [7055881] (imputed) |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST002245 |