SNP Detail For rs7295246
1.Mapping Information
Human SNP ID rs7295246
Human chromosome chr12
Human SNP position 43573874
Pig chromosome chr5
Pig SNP position 77501811
2.Annotation Information
PubMed ID24162737
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24162737
StudyMeta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (late onset)
Initial sample17,008 European ancestry cases, 37,154 European ancestry controls
Replication sample8,572 European ancestry cases, 11,312 European ancestry controls
Region12q12
Chromosome idchr12
Chromosome position43573874
Reported geneADAMTS20
Mapped geneLOC400026 - PUS7L
Upstream gene id400026
Downstream gene id83448
SNP gene ids
Upstream gene distance1703
Downstream gene distance154151
SNP risk allelers7295246-G
SNPsrs7295246
Merged0
SNP id current7295246
Contextupstream_gene_variant
Intergenic1
Allele frequency0.406
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta1.07
%95 Ci[1.04-1.10]
PlatformIllumina [7055881] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST002245