SNP Detail For rs72923818
1.Mapping Information
Human SNP ID rs72923818
Human chromosome chr18
Human SNP position 49157384
Pig chromosome chr1
Pig SNP position 108345273
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxypropylmercapturic acid levels in smokers
Initial sample362 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 438 European ancestry current smoker individuals, 449 Latino current smoker individuals, 704 Japanese ancestry current smoker individuals
Replication sampleNA
Region18q21.1
Chromosome idchr18
Chromosome position49157384
Reported geneNR
Mapped geneDYM
Upstream gene id
Downstream gene id
SNP gene ids54808
Upstream gene distance
Downstream gene distance
SNP risk allelers72923818-?
SNPsrs72923818
Merged
SNP id current72923818
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(EA)
Or beta0.4612
%95 Ci[0.28-0.65] unit increase
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxypropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007014
Study accessionGCST002956