Human SNP ID | rs72817562 |
---|---|
Human chromosome | chr5 |
Human SNP position | 165149962 |
Pig chromosome | chr16 |
Pig SNP position | 63354401 |
PubMed ID | 25993607 |
---|---|
Journal | JAMA Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25993607 |
Study | Meta-analysis of Genome-wide Association Studies for Neuroticism, and the Polygenic Association With Major Depressive Disorder. |
Disease/Trait | Neuroticism |
Initial sample | Up to 627 Cilento individuals, up to 2,296 Erasmus Rupchen Family individuals, up to 1,650 Orcadian individuals, up to 909 Vis individuals, up to 58,179 European ancestry individuals |
Replication sample | Up to 9,786 European ancestry individuals |
Region | 5q34 |
Chromosome id | chr5 |
Chromosome position | 165149962 |
Reported gene | NR |
Mapped gene | LOC105377703, LOC105377702 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105377703, 105377702 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs72817562-T |
SNPs | rs72817562 |
Merged | |
SNP id current | 72817562 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.035 |
%95 Ci | [0.019-0.051] unit increase |
Platform | Affymetrix, Illumina, Perlegen [6949614] (imputed) |
CNV | N |
Mapped trait | neuroticism measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007660 |
Study accession | GCST002920 |