SNP Detail For rs72791417
1.Mapping Information
Human SNP ID rs72791417
Human chromosome chr10
Human SNP position 65983896
Pig chromosome chr14
Pig SNP position 75154065
2.Annotation Information
PubMed ID23897914
JournalPediatrics
Linkwww.ncbi.nlm.nih.gov/pubmed/23897914
StudyA genome-wide association study (GWAS) for bronchopulmonary dysplasia.
Disease/TraitBronchopulmonary dysplasia
Initial sample117 African American newborn cases, 108 African American newborn controls, 448 Hispanic newborn cases, 460 Hispanic newborn controls, 74 Asian or Pacific Islander ancestry newborn cases, 93 Asian or Pacific Islander ancestry newborn controls, 174 European
Replication sample371 newborn cases, 424 newborn controls
Region10q21.3
Chromosome idchr10
Chromosome position65983896
Reported geneCTNNA3
Mapped geneCTNNA3
Upstream gene id
Downstream gene id
SNP gene ids29119
Upstream gene distance
Downstream gene distance
SNP risk allelers72791417-A
SNPsrs72791417
Merged0
SNP id current72791417
Contextintron_variant
Intergenic0
Allele frequency0.16
P value0.000001
Pvalue mlog6
P value text
Or beta1.4493
%95 Ci[0.59-0.8]
PlatformIllumina [1795103]
CNVN
Mapped traitBronchopulmonary dysplasia
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_70589
Study accessionGCST002104