Human SNP ID | rs72768824 |
---|---|
Human chromosome | chr5 |
Human SNP position | 79659016 |
Pig chromosome | chr2 |
Pig SNP position | 90161298 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1/FVC ratio in COPD |
Initial sample | 5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases |
Replication sample | NA |
Region | 5q14.1 |
Chromosome id | chr5 |
Chromosome position | 79659016 |
Reported gene | PAPD4 |
Mapped gene | PAPD4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 167153 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs72768824-T |
SNPs | rs72768824 |
Merged | 0 |
SNP id current | 72768824 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.083 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.02 |
%95 Ci | NR unit decrease |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | response to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST003265 |