SNP Detail For rs72768817
1.Mapping Information
Human SNP ID rs72768817
Human chromosome chr5
Human SNP position 79648548
Pig chromosome chr2
Pig SNP position 90153482
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region5q14.1
Chromosome idchr5
Chromosome position79648548
Reported genePAPD4
Mapped genePAPD4
Upstream gene id
Downstream gene id
SNP gene ids167153
Upstream gene distance
Downstream gene distance
SNP risk allelers72768817-C
SNPsrs72768817
Merged0
SNP id current72768817
Contextintron_variant
Intergenic0
Allele frequency0.085
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.02
%95 CiNR unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265