Human SNP ID | rs7275212 |
---|---|
Human chromosome | chr21 |
Human SNP position | 38480628 |
Pig chromosome | chr13 |
Pig SNP position | 212195622 |
PubMed ID | 21738478 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21738478 |
Study | Identification of nine novel loci associated with white blood cell subtypes in a Japanese population. |
Disease/Trait | White blood cell types |
Initial sample | 8,794 Japanese ancestry individuals |
Replication sample | 5,998 Japanese ancestry individuals |
Region | 21q22.2 |
Chromosome id | chr21 |
Chromosome position | 38480628 |
Reported gene | ERG |
Mapped gene | ERG |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2078 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7275212-T |
SNPs | rs7275212 |
Merged | 0 |
SNP id current | 7275212 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 0.000000000000000002 |
Pvalue mlog | 17.698970004336 |
P value text | (basophil count) |
Or beta | 0.197 |
%95 Ci | [0.16-0.24] unit increase |
Platform | Illumina [2178645] (imputed) |
CNV | N |
Mapped trait | basophil count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005090 |
Study accession | GCST001134 |