SNP Detail For rs7275212
1.Mapping Information
Human SNP ID rs7275212
Human chromosome chr21
Human SNP position 38480628
Pig chromosome chr13
Pig SNP position 212195622
2.Annotation Information
PubMed ID21738478
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21738478
StudyIdentification of nine novel loci associated with white blood cell subtypes in a Japanese population.
Disease/TraitWhite blood cell types
Initial sample8,794 Japanese ancestry individuals
Replication sample5,998 Japanese ancestry individuals
Region21q22.2
Chromosome idchr21
Chromosome position38480628
Reported geneERG
Mapped geneERG
Upstream gene id
Downstream gene id
SNP gene ids2078
Upstream gene distance
Downstream gene distance
SNP risk allelers7275212-T
SNPsrs7275212
Merged0
SNP id current7275212
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.000000000000000002
Pvalue mlog17.698970004336
P value text(basophil count)
Or beta0.197
%95 Ci[0.16-0.24] unit increase
PlatformIllumina [2178645] (imputed)
CNVN
Mapped traitbasophil count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005090
Study accessionGCST001134