SNP Detail For rs72743461
1.Mapping Information
Human SNP ID rs72743461
Human chromosome chr15
Human SNP position 67149412
Pig chromosome chr1
Pig SNP position 182940533
2.Annotation Information
PubMed ID26343387
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26343387
StudyA comprehensive 1000 Genomes-based genome-wide association meta-analysis of coronary artery disease.
Disease/TraitMyocardial infarction
Initial sample27,509 European ancestry cases, 130 African American cases, 278 Hispanic American cases, 10,257 South Asian ancestry cases, 288 Lebanese ancestry cases, 1,687 East Asian ancestry cases, 99,121 European ancestry controls, 2,778 African American controls, 3
Replication sampleNA
Region15q22.33
Chromosome idchr15
Chromosome position67149412
Reported geneSMAD3
Mapped geneSMAD3
Upstream gene id
Downstream gene id
SNP gene ids4088
Upstream gene distance
Downstream gene distance
SNP risk allelers72743461-C
SNPsrs72743461
Merged
SNP id current72743461
Contextintron_variant
Intergenic0
Allele frequency0.8
P value0.0000001
Pvalue mlog7
P value text(additive model)
Or beta1.07
%95 Ci[1.05-1.1]
PlatformAffymetrix, Illumina [8600000] (imputed)
CNVN
Mapped traitmyocardial infarction
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000612
Study accessionGCST003117