Human SNP ID | rs7270101 |
---|---|
Human chromosome | chr20 |
Human SNP position | 3213247 |
Pig chromosome | chr17 |
Pig SNP position | 36842960 |
PubMed ID | 20173735 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20173735 |
Study | ITPA gene variants protect against anaemia in patients treated for chronic hepatitis C. |
Disease/Trait | Chronic hepatitis C infection |
Initial sample | 988 European ancestry cases, 198 African American cases, 100 Hispanic cases |
Replication sample | NA |
Region | 20p13 |
Chromosome id | chr20 |
Chromosome position | 3213247 |
Reported gene | ITPA |
Mapped gene | ITPA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3704 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7270101-C |
SNPs | rs7270101 |
Merged | 0 |
SNP id current | 7270101 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.11 |
P value | 9E-76 |
Pvalue mlog | 75.0457574905606 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [565759] |
CNV | N |
Mapped trait | Chronic Hepatitis C infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004220 |
Study accession | GCST000604 |