SNP Detail For rs7270101
1.Mapping Information
Human SNP ID rs7270101
Human chromosome chr20
Human SNP position 3213247
Pig chromosome chr17
Pig SNP position 36842960
2.Annotation Information
PubMed ID20173735
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20173735
StudyITPA gene variants protect against anaemia in patients treated for chronic hepatitis C.
Disease/TraitChronic hepatitis C infection
Initial sample988 European ancestry cases, 198 African American cases, 100 Hispanic cases
Replication sampleNA
Region20p13
Chromosome idchr20
Chromosome position3213247
Reported geneITPA
Mapped geneITPA
Upstream gene id
Downstream gene id
SNP gene ids3704
Upstream gene distance
Downstream gene distance
SNP risk allelers7270101-C
SNPsrs7270101
Merged0
SNP id current7270101
Contextintron_variant
Intergenic0
Allele frequency0.11
P value9E-76
Pvalue mlog75.0457574905606
P value text
Or beta
%95 Ci
PlatformIllumina [565759]
CNVN
Mapped traitChronic Hepatitis C infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004220
Study accessionGCST000604