SNP Detail For rs72699846
1.Mapping Information
Human SNP ID rs72699846
Human chromosome chr14
Human SNP position 92632272
Pig chromosome chr7
Pig SNP position 120729294
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region14q32.12
Chromosome idchr14
Chromosome position92632272
Reported geneRIN3
Mapped geneRIN3
Upstream gene id
Downstream gene id
SNP gene ids79890
Upstream gene distance
Downstream gene distance
SNP risk allelers72699846-A
SNPsrs72699846
Merged0
SNP id current72699846
Contextintron_variant
Intergenic0
Allele frequency0.156
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta0.013
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264