SNP Detail For rs72689705
1.Mapping Information
Human SNP ID rs72689705
Human chromosome chr8
Human SNP position 80550062
Pig chromosome chr4
Pig SNP position 61342851
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxy-1-methylpropylmercapturic acid levels in smokers
Initial sample361 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 440 European ancestry current smoker individuals, 452 Latino current smoker individuals, 702 Japanese ancestry current smoker individuals
Replication sampleNA
Region8q21.13
Chromosome idchr8
Chromosome position80550062
Reported geneNR
Mapped geneZBTB10 - LOC105375923
Upstream gene id65986
Downstream gene id105375923
SNP gene ids
Upstream gene distance23797
Downstream gene distance8120
SNP risk allelers72689705-?
SNPsrs72689705
Merged
SNP id current72689705
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000005
Pvalue mlog7.30102999566398
P value text(AA)
Or beta0.7981
%95 Ci[NR] unit decrease
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxy-1-methylpropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007015
Study accessionGCST002957