SNP Detail For rs72674100
1.Mapping Information
Human SNP ID rs72674100
Human chromosome chr4
Human SNP position 97164138
Pig chromosome chr8
Pig SNP position 131817412
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region4q22.3
Chromosome idchr4
Chromosome position97164138
Reported geneIntergenic
Mapped geneCOX7A2P2 - STPG2-AS1
Upstream gene id1348
Downstream gene id101410545
SNP gene ids
Upstream gene distance260949
Downstream gene distance202788
SNP risk allelers72674100-A
SNPsrs72674100
Merged0
SNP id current72674100
Contextintergenic_variant
Intergenic1
Allele frequency0.943
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.035
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264