SNP Detail For rs72657954
1.Mapping Information
Human SNP ID rs72657954
Human chromosome chr8
Human SNP position 71858071
Pig chromosome chr4
Pig SNP position 69398506
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region8q13.3
Chromosome idchr8
Chromosome position71858071
Reported geneLOC100132891
Mapped geneLOC100132891
Upstream gene id
Downstream gene id
SNP gene ids100132891
Upstream gene distance
Downstream gene distance
SNP risk allelers72657954-A
SNPsrs72657954
Merged0
SNP id current72657954
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.0000002
Pvalue mlog6.69897000433601
P value text(AA)
Or beta0.288
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264