SNP Detail For rs7263077
1.Mapping Information
Human SNP ID rs7263077
Human chromosome chr20
Human SNP position 42605938
Pig chromosome chr17
Pig SNP position 50437651
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in obese individuals
Initial sample4,613 European ancestry male individuals, 4,690 European ancestry female individuals, 142 European ancestry individuals
Replication sampleNA
Region20q12
Chromosome idchr20
Chromosome position42605938
Reported genePTPRT
Mapped genePTPRT
Upstream gene id
Downstream gene id
SNP gene ids11122
Upstream gene distance
Downstream gene distance
SNP risk allelers7263077-G
SNPsrs7263077
Merged0
SNP id current7263077
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.09
%95 Ci[0.051-0.129] kg/m2 increase
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traitobese body mass index status, urate measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007041, http://www.ebi.ac.uk/efo/EFO_0004531
Study accessionGCST002828