SNP Detail For rs7260329
1.Mapping Information
Human SNP ID rs7260329
Human chromosome chr19
Human SNP position 41015733
Pig chromosome chr6
Pig SNP position 44976496
2.Annotation Information
PubMed ID20418888
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20418888
StudySequence variants at CHRNB3-CHRNA6 and CYP2A6 affect smoking behavior.
Disease/TraitSmoking behavior
Initial sample31,266 European ancestry individuals
Replication sample54,731 European ancestry individuals
Region19q13.2
Chromosome idchr19
Chromosome position41015733
Reported geneCYP2B6
Mapped geneCYP2B6
Upstream gene id
Downstream gene id
SNP gene ids1555
Upstream gene distance
Downstream gene distance
SNP risk allelers7260329-G
SNPsrs7260329
Merged0
SNP id current7260329
Contextintron_variant
Intergenic0
Allele frequency0.69
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.2
%95 Ci[0.12-0.28] CPD increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitsmoking behavior
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318
Study accessionGCST000667