SNP Detail For rs7250872
1.Mapping Information
Human SNP ID rs7250872
Human chromosome chr19
Human SNP position 1811604
Pig chromosome chr2
Pig SNP position 77222053
2.Annotation Information
PubMed ID19416921
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/19416921
StudyGenome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
Disease/TraitBipolar disorder
Initial sample3,683 European ancestry cases, 14,507 European ancestry controls
Replication sampleNA
Region19p13.3
Chromosome idchr19
Chromosome position1811604
Reported geneNR
Mapped geneATP8B3
Upstream gene id
Downstream gene id
SNP gene ids148229
Upstream gene distance
Downstream gene distance
SNP risk allelers7250872-T
SNPsrs7250872
Merged0
SNP id current7250872
Contextmissense_variant
Intergenic0
Allele frequency0.69
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.21
%95 Ci[1.12-1.31]
PlatformAffymetrix, Illumina [2366197] (imputed)
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST000387