SNP Detail For rs7245858
1.Mapping Information
Human SNP ID rs7245858
Human chromosome chr19
Human SNP position 50927340
Pig chromosome chr1
Pig SNP position 227347319
2.Annotation Information
PubMed ID23535033
JournalAlzheimers Dement
Linkwww.ncbi.nlm.nih.gov/pubmed/23535033
StudyGenome-wide association study of the rate of cognitive decline in Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (cognitive decline)
Initial sample303 European ancestry cases
Replication sample
Region19q13.41
Chromosome idchr19
Chromosome position50927340
Reported geneLOC390956
Mapped geneLOC390956
Upstream gene id
Downstream gene id
SNP gene ids390956
Upstream gene distance
Downstream gene distance
SNP risk allelers7245858-?
SNPsrs7245858
Merged0
SNP id current7245858
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.04
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.28
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001915