SNP Detail For rs7243299
1.Mapping Information
Human SNP ID rs7243299
Human chromosome chr18
Human SNP position 7755773
Pig chromosome chr6
Pig SNP position 93139200
2.Annotation Information
PubMed ID21546767
JournalAm J Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/21546767
StudyGenome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes.
Disease/TraitDialysis-related mortality
Initial sample610 African American type 2 diabetes cases
Replication sampleNA
Region18p11.23
Chromosome idchr18
Chromosome position7755773
Reported genePTPRM
Mapped genePTPRM
Upstream gene id
Downstream gene id
SNP gene ids5797
Upstream gene distance
Downstream gene distance
SNP risk allelers7243299-?
SNPsrs7243299
Merged0
SNP id current7243299
Contextintron_variant
Intergenic0
Allele frequency0.1
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.63
%95 Ci[1.31-2.03]
PlatformAffymetrix [832357]
CNVN
Mapped traitchronic kidney disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003884
Study accessionGCST001066