Human SNP ID | rs7243299 |
---|---|
Human chromosome | chr18 |
Human SNP position | 7755773 |
Pig chromosome | chr6 |
Pig SNP position | 93139200 |
PubMed ID | 21546767 |
---|---|
Journal | Am J Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/21546767 |
Study | Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. |
Disease/Trait | Dialysis-related mortality |
Initial sample | 610 African American type 2 diabetes cases |
Replication sample | NA |
Region | 18p11.23 |
Chromosome id | chr18 |
Chromosome position | 7755773 |
Reported gene | PTPRM |
Mapped gene | PTPRM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5797 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7243299-? |
SNPs | rs7243299 |
Merged | 0 |
SNP id current | 7243299 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.63 |
%95 Ci | [1.31-2.03] |
Platform | Affymetrix [832357] |
CNV | N |
Mapped trait | chronic kidney disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003884 |
Study accession | GCST001066 |