Human SNP ID | rs7238309 |
---|---|
Human chromosome | chr18 |
Human SNP position | 57478460 |
Pig chromosome | chr1 |
Pig SNP position | 117596188 |
PubMed ID | 26718567 |
---|---|
Journal | Neurology |
Link | www.ncbi.nlm.nih.gov/pubmed/26718567 |
Study | Shared genetic susceptibility of vascular-related biomarkers with ischemic and recurrent stroke. |
Disease/Trait | Thrombomodulin levels in ischemic stroke |
Initial sample | up to 1,725 European ancestry cases, up to 258 African ancestry cases, up to 117 cases |
Replication sample | NA |
Region | 18q21.31 |
Chromosome id | chr18 |
Chromosome position | 57478460 |
Reported gene | NR |
Mapped gene | ONECUT2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9480 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7238309-? |
SNPs | rs7238309 |
Merged | |
SNP id current | 7238309 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [7500450] (imputed) |
CNV | N |
Mapped trait | Ischemic stroke |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0002140 |
Study accession | GCST003234 |