SNP Detail For rs7238309
1.Mapping Information
Human SNP ID rs7238309
Human chromosome chr18
Human SNP position 57478460
Pig chromosome chr1
Pig SNP position 117596188
2.Annotation Information
PubMed ID26718567
JournalNeurology
Linkwww.ncbi.nlm.nih.gov/pubmed/26718567
StudyShared genetic susceptibility of vascular-related biomarkers with ischemic and recurrent stroke.
Disease/TraitThrombomodulin levels in ischemic stroke
Initial sampleup to 1,725 European ancestry cases, up to 258 African ancestry cases, up to 117 cases
Replication sampleNA
Region18q21.31
Chromosome idchr18
Chromosome position57478460
Reported geneNR
Mapped geneONECUT2
Upstream gene id
Downstream gene id
SNP gene ids9480
Upstream gene distance
Downstream gene distance
SNP risk allelers7238309-?
SNPsrs7238309
Merged
SNP id current7238309
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [7500450] (imputed)
CNVN
Mapped traitIschemic stroke
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0002140
Study accessionGCST003234