Human SNP ID | rs7231041 |
---|---|
Human chromosome | chr18 |
Human SNP position | 25813140 |
Pig chromosome | chr6 |
Pig SNP position | 103447536 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 18q11.2 |
Chromosome id | chr18 |
Chromosome position | 25813140 |
Reported gene | SS18 |
Mapped gene | ZNF521 - LOC105372033 |
Upstream gene id | 25925 |
Downstream gene id | 105372033 |
SNP gene ids | |
Upstream gene distance | 460890 |
Downstream gene distance | 144844 |
SNP risk allele | rs7231041-G |
SNPs | rs7231041 |
Merged | 0 |
SNP id current | 7231041 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.174 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Moderate activity ) |
Or beta | 0.04 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |
PubMed ID | 23251661 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 18q11.2 |
Chromosome id | chr18 |
Chromosome position | 25813140 |
Reported gene | SS18 |
Mapped gene | ZNF521 - LOC105372033 |
Upstream gene id | 25925 |
Downstream gene id | 105372033 |
SNP gene ids | |
Upstream gene distance | 460890 |
Downstream gene distance | 144844 |
SNP risk allele | rs7231041-G |
SNPs | rs7231041 |
Merged | 0 |
SNP id current | 7231041 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.174 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Moderate activity ) |
Or beta | 0.03 |
%95 Ci | [NR] %awake time increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |
PubMed ID | 23251661 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 18q11.2 |
Chromosome id | chr18 |
Chromosome position | 25813140 |
Reported gene | SS18 |
Mapped gene | ZNF521 - LOC105372033 |
Upstream gene id | 25925 |
Downstream gene id | 105372033 |
SNP gene ids | |
Upstream gene distance | 460890 |
Downstream gene distance | 144844 |
SNP risk allele | rs7231041-G |
SNPs | rs7231041 |
Merged | 0 |
SNP id current | 7231041 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.174 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Moderate&vigorous activity ) |
Or beta | 0.03 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |