Human SNP ID | rs7228085 |
---|---|
Human chromosome | chr18 |
Human SNP position | 49634444 |
Pig chromosome | chr1 |
Pig SNP position | 108704060 |
PubMed ID | 22286219 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22286219 |
Study | Genome-wide association study identifies multiple loci influencing human serum metabolite levels. |
Disease/Trait | Lipid metabolism phenotypes |
Initial sample | 8,330 European ancestry individuals |
Replication sample | NA |
Region | 18q21.1 |
Chromosome id | chr18 |
Chromosome position | 49634444 |
Reported gene | LIPG |
Mapped gene | LOC105372112 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105372112 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7228085-? |
SNPs | rs7228085 |
Merged | 0 |
SNP id current | 7228085 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000007 |
Pvalue mlog | 10.1549019599857 |
P value text | (XL-HDL-TG) |
Or beta | 0.11 |
%95 Ci | [0.071-0.149] unit increase |
Platform | Illumina [~ 7700000] (imputed) |
CNV | N |
Mapped trait | lipid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004529 |
Study accession | GCST001392 |