SNP Detail For rs7219451
1.Mapping Information
Human SNP ID rs7219451
Human chromosome chr17
Human SNP position 40800750
Pig chromosome chr12
Pig SNP position 21830942
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region17q21.2
Chromosome idchr17
Chromosome position40800750
Reported geneKRT28, KRT10
Mapped geneKRT28 - LOC105371776
Upstream gene id162605
Downstream gene id105371776
SNP gene ids
Upstream gene distance791
Downstream gene distance712
SNP risk allelers7219451-?
SNPsrs7219451
Merged0
SNP id current7219451
Contextupstream_gene_variant
Intergenic1
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text(SI+M)
Or beta0.17
%95 Ci[0.052-0.288] unit decrease
PlatformIllumina [693128]
CNVN
Mapped traitinsulin sensitivity measurement, glucose homeostasis measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004471, http://www.ebi.ac.uk/efo/EFO_0006896
Study accessionGCST002726